I have records in Oracle that have valid records with null geometries. The geometry type is point, so the geodb_point type is used in FME for the pgdb - BUT this excludes all the null geometry records.
if there is a discrepancy between the actual geometry and the format attributes, you can often solve this by inserting a GeometryValidator.
Another strategy could be to test for the number of coordinates (CoordinateCounter) and to insert a GeometryRemover if there are no coordinates, which should clear up the internal format descriptors.
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